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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936761.1_cds_XP_016482251.1_73497
CDS Infomation

[gene=LOC107803132] [db_xref=GeneID:107803132] [protein=4-alpha-glucanotransferase, chloroplastic/amyloplastic] [protein_id=XP_016482251.1] [location=join(34569..34931,46102..46164,46533..46621,46740..46800,47092..47170,48356..48492,48584..48742,48846..48922,49158..49297,49383..49414,49492..49566,50808..50880,50982..51070,51291..51335,51435..51587,52629..52733)] [gbkey=CDS]
Sequence

ATGGCAATTCACACTTGTTTCTCGCTAATACCTTCTTCTTTCTCTTCACCCAAACTGGAT
TTCCCAAAGAACAGCATTTTTCAGTTTCCTAGAGAAATCTGGTCAAAACCCAGTTTCAAT
TCTGATATGAAAAGATCGTTTGTTGGGGTACAGTTTCAAAATGGAAACGTGCCTTGTGTA
GGTGAGGACTTGCCGATTGAGTATGCTTATTGGTTGCCAAAACGGGACCCAAGTGATCGT
AGAAGAGCTGGAATTTTGCTACATCCGACGTCGTTTCCTGGACCTTATGGTATAGGGGAT
CTTGGCCCTCAGGCTTTTCAGTTTCTTGATTGGCTTCATCTTGCTGGTTGTTCCCTTTGG
CAGGTTCTTCCACTAGTACCGCCTGGAAAAAGAGGCAACGAAGATGGATCACCCTATTCA
GGCCAGGATGCAAATTGTGGTAACACCCTTTTGATTTCTCTTGAAGAACTTGTTGATGAT
GGTTTGCTGAAGAAGGAGGAGCTTCCAGAGCCACTACCTACGGATCGTATCAATTACTCG
ACTGTTGCTGAGATAAAAGATCCTTTGATAGCCAAGGCAGCAAAGAGGCTTCTCTCCAGT
GAAGGGAAACTGAAAGAACAGCTCGAAAACTTTCGCCGGGATCCAAATATTTCGAGTTGG
CTAGAGGATGCTGCTTATTTTGCTGCCATAGACAACTCTTTAAACACTGTTAGCTGGTAC
GATTGGCCTGAACCATTGAAAAATCGCCATCTTGCAGCTCTAGAAGAAGTTTATCAAAGT
GAAAAGGATTTTATTGACACATTCATTGCACAACAGTTCTTATTCCAAAGACAATGGCAA
AAAGTTCGTGACTATGCACGATCAAAAGGAATCAGTATAATGGGAGACATGCCGATATAT
GTTGGATATCACAGTGCTGATGTTTGGGCCAACAAGAAACATTTTCTGCTGAATAGGAAA
GGTTTCCCTCTTATAGTTAGTGGTGTTCCTCCAGACGCCTTTAGTGAAGCTGGTCAACTA
TGGGGCAGCCCGCTCTATGATTGGAAAGCCATGGAGAAGGATGGATTTTCGTGGTGGATA
CGCCGCATTCGACGTGCAACGGATCTTTTTGATGAATTTAGGATAGATCACTTTAGAGGA
TTTGCTGGATTTTGGGCTGTTCCTTCTGAAGCAAAAGTTGCTATGCTGGGAAGGTGGAAG
GTGGGACCTGGAAAACCTTTGTTTGATGCTATCTTCCAAGCTGTTGGGAAGATCAATATT
ATAGCAGAAGACTTGGGAGTAATCACCGAGGACGTTGTTCAGCTTAGAAAGTCCATAGAG
GCACCTGGCATGGCCGTACTCCAGTTTGGATTTGGCAGTGACGCAGAAAACCCTCATTTG
CCTCACAATCATGAGCAGAACCAAGTAGTGTATACTGGAACTCATGATAATGATACGACC
CGAGGTTGGTGGAACATCTTGCCACAGGAAGAGAAATCCAATGTATTAAAGTATTTATCA
AACATTGAGGAAGAGCAAATATCATGGGGCCTTATCGAAGCTGCAGTTTCTTCTGTAGCC
CGTATCGCAATTATACCAATGCAGGATGTACTTGGGCTTGGGAGTGAATCCCGAATGAAT
ATTCCAGCAACTCAGTTTGGAAACTGGAGTTGGAGGATTCCTAGTTCTACCAGCTTCGAC
AGCTTGGATGCGGAAGCAAAGAAGCTAAGAGATATACTTGCAACTTATGGGCGGTTGTGA

Peptide Sequence

PEP ID

XP_016482251.1
PEP Infomation

PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Nicotiana tabacum]
Sequence

MAIHTCFSLIPSSFSSPKLDFPKNSIFQFPREIWSKPSFNSDMKRSFVGVQFQNGNVPCV
GEDLPIEYAYWLPKRDPSDRRRAGILLHPTSFPGPYGIGDLGPQAFQFLDWLHLAGCSLW
QVLPLVPPGKRGNEDGSPYSGQDANCGNTLLISLEELVDDGLLKKEELPEPLPTDRINYS
TVAEIKDPLIAKAAKRLLSSEGKLKEQLENFRRDPNISSWLEDAAYFAAIDNSLNTVSWY
DWPEPLKNRHLAALEEVYQSEKDFIDTFIAQQFLFQRQWQKVRDYARSKGISIMGDMPIY
VGYHSADVWANKKHFLLNRKGFPLIVSGVPPDAFSEAGQLWGSPLYDWKAMEKDGFSWWI
RRIRRATDLFDEFRIDHFRGFAGFWAVPSEAKVAMLGRWKVGPGKPLFDAIFQAVGKINI
IAEDLGVITEDVVQLRKSIEAPGMAVLQFGFGSDAENPHLPHNHEQNQVVYTGTHDNDTT
RGWWNILPQEEKSNVLKYLSNIEEEQISWGLIEAAVSSVARIAIIPMQDVLGLGSESRMN
IPATQFGNWSWRIPSSTSFDSLDAEAKKLRDILATYGRL

Transcript Sequence

Gene sequence data has not been registered.